121.     Bamford, J. K. H., Bamford, D. H., Li, T. and Thomas, G. J., Jr., "Structural Studies of the Enveloped dsRNA Bacteriophage f6 of Pseudomonas syringae by Raman Spectroscopy. II. Nucleocapsid Structure and Thermostability of the Virion, Nucleocapsid and Polymerase Complex," J. Mol. Biol. 230:473-482, 1993.

122.     Thomas, G. J., Jr., "Molecular Interactions in Viruses Investigated by Raman Spectroscopy: The Chromosome and Capsid of Bacterial Virus P22." In Static and Dynamic Light Scattering in Medicine and Biology, Nossal, R. J., Pecora, R. and Priezzhev, V. A., Eds., SPIE Publishing, Bellingham, WA, Volume 1884, pp. 45-54, 1993.

123.     Li, H., Hanson, C., Fuchs, J. A., Woodward, C. and Thomas, G. J., Jr., "Determination of the pK_a Values of Active-Center Cysteines, Cysteines-32 and -35, in Escherichia coli Thioredoxin by Raman Spectroscopy," Biochemistry 32:5800-5808, 1993.

124.     Thomas, G. J., Jr., Benevides, J. M., Duguid, J. and Bloomfield, V. A., "Roles of Cations in the Structure, Stability and Condensation of DNA." In Spectroscopy of Biological Molecules, Theophanides, T., Anastassapoulou, J. and Fotopoulos, N., Eds., Kluwer Academic Publishers, Dordrecht, pp. 39-45, 1993.

125.     Tuma, R., Vohník, S., Li, H. and Thomas, G. J., Jr., "Cysteine Conformation and Sulfhydryl Interactions in Proteins and Viruses. 3. Quantitative Measurement of the Raman S-H Band Intensity and Frequency," Biophys. J. 65:1066-1072, 1993.

126.     Duguid, J., Bloomfield, V. A., Benevides, J. M. and Thomas, G. J., Jr., "Raman Spectroscopy of DNA-Metal Complexes. I. Interactions and Conformational Effects of the Divalent Cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd, and Cd," Biophys. J. 65:1916-1928, 1993.

127.     Li, T., Johnson, J. E. and Thomas, G. J., Jr., "Raman Dynamic Probe of Hydrogen Exchange in Bean Pod Mottle Virus: Base-Specific Retardation of Exchange in Packaged ssRNA," Biophys. J. 65:1963-1972, 1993.

128.     Guan, Y., Wurrey, C. J. and Thomas, G. J., Jr., "Vibrational Analysis of Nucleic Acids. I. The Phosphodiester Group in Dimethyl Phosphate Model Compounds: (CH₃O)₂PO₂^-, (CD₃O)₂PO₂^-, and (13CH₃O)₂PO₂^-," Biophys. J. 66:225-235, 1994.

129.     Overman, S. A., Aubrey, K. L., Vispo, N. S., Cesareni, G. and Thomas, G. J., Jr., "Novel Tyrosine Markers in Raman Spectra of Wild-Type and Mutant (Y21M and Y24M) Ff Virions Indicate Unusual Environments for Coat Protein Phenoxyls," Biochemistry 33:1037-1042, 1994.

130.     Benevides, J. M., Weiss, M. A. and Thomas, G. J., Jr., "An Altered Specificity Mutation in the l Repressor Induces Global Reorganization of the Protein-DNA Interface," J. Biol. Chem. 269:10869-10878, 1994.

131.     Aubrey, K. L., Towse, S. A., and Thomas, G. J., Jr., "Viruses and Raman Spectroscopy: Determination of Secondary Structures of Viral Capsids and Chromosomes by Difference Methods." In Laser Applications in Life Sciences, Korppi-Tommola, J. E. I., Ed., SPIE Publishing, Bellingham, WA, Vol. 1921, pp. 264-273, 1994.

132.     Walin, L., Tuma, R., Thomas, G. J., Jr. and Bamford, D. H., "Purification of Viruses and Macromolecular Assemblies for Structural Investigations Using a Novel Ion Exchange Method," Virology 201:1-7, 1994.

133.     Reilly, K. E. and Thomas, G. J., Jr., "Hydrogen Exchange Dynamics of the P22 Virion Determined by Time-Resolved Raman Spectroscopy: Effects of Chromosome Packaging on the Kinetics of Nucleotide Exchanges," J. Mol. Biol. 241:68-82, 1994.

134.     Miura, T. and Thomas, G. J., Jr., "Structural Polymorphism of Telomere DNA: Interquadruplex and Duplex-Quadruplex Conversions Probed by Raman Spectroscopy," Biochemistry 33:7848-7856, 1994.

135.     Benevides, J. M., Kukolj, G., Autexier, C., Aubrey, K. L., DuBow, M. S. and Thomas, G. J., Jr., "Secondary Structure and Interaction of Phage D108 Ner Repressor with a 61-Base- Pair Operator: Evidence for Altered Protein and DNA Structures in the Complex," Biochemistry 33:10701-10710, 1994.

136.     Thomas, G. J., Jr., Benevides, J. M., Overman, S. A., Ueda, T., Ushizawa, K., Saitoh, M. and Tsuboi, M., "Polarized Raman Spectra of Oriented Fibers of A DNA and B DNA: Anisotropic and Isotropic Local Raman Tensors of Base and Backbone Vibrations," Biophys. J. 68:1073-1088, 1995.

137.     Miura, T. and Thomas, G. J., Jr., "Raman Spectroscopy of Proteins and Their Assemblies." In Subcellular Biochemistry. Volume 24: Proteins: Structure, Function and Engineering, Biswas, B. B. and Roy, S., Eds., Plenum Publishing, NY, pp. 55-99, 1995.

138.     Overman, S. A. and Thomas, G. J., Jr., "Raman Spectroscopy of the Filamentous Virus Ff (fd, f1, M13): Structural Interpretation for Coat Protein Aromatics," Biochemistry 34:5440- 5451, 1995.

139.     Russell, M. P., Vohník, S. and Thomas, G. J., Jr., "Design and Performance of an Ultraviolet Resonance Raman Spectrometer for Proteins and Nucleic Acids," Biophys. J. 68:1607-1612, 1995.

140.     Miura, T., Benevides, J. M. and Thomas, G. J., Jr., "A Phase Diagram for Sodium and Potassium Ion Control of Polymorphism in Telomeric DNA," J. Mol. Biol. 248:233-238, 1995.

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